Survival-associated eQTLs across different cancer types
We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
|
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
|---|---|---|---|---|---|---|---|---|---|
| KIRP | rs12221230 | chr10:75604972 | T/C | 2.22E-6 | 213 | 15.1 | 18.72 | 5.57 | KM Plot |
| KIRP | rs1222809 | chr5:79917517 | A/G | 4.64E-7 | 212 | 18.02 | 14.83 | 7.47 | KM Plot |
| KIRP | rs12250362 | chr10:74975381 | C/G | 5.94E-12 | 212 | 17 | 7.27 | 5.6 | KM Plot |
| KIRP | rs12261028 | chr10:74973655 | A/C | 5.94E-12 | 212 | 17 | 7.27 | 5.6 | KM Plot |
| KIRP | rs12273153 | chr11:34956291 | A/G | 4.8E-12 | 212 | 17.08 | 12.6 | 5.57 | KM Plot |
| KIRP | rs12279549 | chr11:34977312 | G/A | 0 | 213 | 16.43 | 15.48 | 3.83 | KM Plot |
| KIRP | rs12280293 | chr11:34993777 | T/G | 0 | 213 | 16.43 | 15.48 | 3.83 | KM Plot |
| KIRP | rs12283472 | chr11:34949502 | G/A | 3.36E-12 | 213 | 16.43 | 17 | 5.57 | KM Plot |
| KIRP | rs12283652 | chr11:34909078 | C/T | 4.21E-12 | 214 | 17.08 | 12.6 | 5.57 | KM Plot |
| KIRP | rs12286538 | chr11:34963916 | A/G | 4.8E-12 | 213 | 17.08 | 12.02 | 5.57 | KM Plot |
| KIRP | rs12289996 | chr11:34965407 | A/G | 4.15E-12 | 212 | 16.43 | 16.72 | 5.57 | KM Plot |
| KIRP | rs12292363 | chr11:34989901 | G/T | 0 | 213 | 16.43 | 15.48 | 3.83 | KM Plot |
| KIRP | rs12293733 | chr11:34932604 | A/G | 4.21E-12 | 213 | 17.08 | 13.17 | 5.57 | KM Plot |
| KIRP | rs12295452 | chr11:34996717 | G/A | 0 | 213 | 16.43 | 17 | 0.97 | KM Plot |
| KIRP | rs12323710 | chr14:24173077 | C/T | 4.4E-6 | 212 | 17.03 | 12.63 | 1.2 | KM Plot |